Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC068137.2-201ENST00000605408 478 ntBASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA4Q9UN74 PCDHA14-201ENST00000506751 2298 ntBASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 AC109635.5-201ENST00000533593 962 ntBASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 AC002347.1-201ENST00000569543 541 ntBASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 AL009183.1-201ENST00000603760 355 ntBASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 PKD1P1-201ENST00000458669 6805 ntBASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 GGT4P-201ENST00000623672 1708 ntBASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA4Q9UN74 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 AC004832.2-201ENST00000426397 482 ntBASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 AP002472.1-201ENST00000577490 586 ntBASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHA4Q9UN74 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 MCCD1P2-201ENST00000423228 335 ntBASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 AC021097.1-201ENST00000607902 574 ntBASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms