Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 AC092580.3-201ENST00000430932 139 ntBASIC16.83■□□□□ 0.28
MBD1Q9UIS9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
MBD1Q9UIS9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 SLC22A20-204ENST00000530038 1673 ntBASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AC069120.2-201ENST00000524091 540 ntBASIC16.82■□□□□ 0.28
MBD1Q9UIS9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AP000842.3-202ENST00000569238 1080 ntBASIC16.82■□□□□ 0.28
MBD1Q9UIS9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AC027307.2-201ENST00000591252 911 ntBASIC16.82■□□□□ 0.28
MBD1Q9UIS9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AC008267.7-201ENST00000624570 1194 ntBASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD1Q9UIS9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 MIR346-201ENST00000362234 95 ntBASIC16.81■□□□□ 0.28
MBD1Q9UIS9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 RNU1-129P-201ENST00000384064 167 ntBASIC16.81■□□□□ 0.28
MBD1Q9UIS9 AL512638.1-201ENST00000457493 794 ntBASIC16.81■□□□□ 0.28
MBD1Q9UIS9 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.81■□□□□ 0.28
MBD1Q9UIS9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 U1.21-201ENST00000580816 167 ntBASIC16.81■□□□□ 0.28
MBD1Q9UIS9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 AL031055.1-201ENST00000606362 631 ntBASIC16.81■□□□□ 0.28
MBD1Q9UIS9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD1Q9UIS9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms