Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
LRFN1Q9P244 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.39■□□□□ 0.05
LRFN1Q9P244 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 PMS2P4-201ENST00000412466 1052 ntBASIC15.39■□□□□ 0.05
LRFN1Q9P244 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 HLA-J-203ENST00000494367 1087 ntBASIC15.39■□□□□ 0.05
LRFN1Q9P244 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 AC243562.1-201ENST00000560672 389 ntBASIC15.39■□□□□ 0.05
LRFN1Q9P244 AC025678.2-201ENST00000562061 970 ntBASIC15.39■□□□□ 0.05
LRFN1Q9P244 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 LINC00628-201ENST00000628516 1289 ntBASIC15.39■□□□□ 0.05
LRFN1Q9P244 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.39■□□□□ 0.05
LRFN1Q9P244 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRFN1Q9P244 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 IGHV3-62-201ENST00000520057 340 ntBASIC15.38■□□□□ 0.05
LRFN1Q9P244 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 MIR3909-201ENST00000579518 119 ntBASIC15.38■□□□□ 0.05
LRFN1Q9P244 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.38■□□□□ 0.05
LRFN1Q9P244 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRFN1Q9P244 TUBB8P12-201ENST00000308911 1335 ntBASIC15.38■□□□□ 0.05
LRFN1Q9P244 TUBB7P-202ENST00000428444 1305 ntBASIC15.38■□□□□ 0.05
LRFN1Q9P244 TUBB8P7-204ENST00000567960 1332 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms