Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AL139384.1-201ENST00000612143 3047 ntBASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.15■□□□□ 0.18
SPHK1Q9NYA1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SPHK1Q9NYA1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.18
SPHK1Q9NYA1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.14■□□□□ 0.18
SPHK1Q9NYA1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.18
SPHK1Q9NYA1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 AC211486.1-202ENST00000416371 468 ntBASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 AC211476.1-201ENST00000503899 468 ntBASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 AP002490.2-201ENST00000524791 560 ntBASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK1Q9NYA1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 AC092474.2-201ENST00000424288 719 ntBASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 RPS8P6-201ENST00000426177 609 ntBASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 PCDHA12-202ENST00000613593 2588 ntBASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK1Q9NYA1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms