Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 AL645728.1-201ENST00000366221 2101 ntBASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 AL023806.1-201ENST00000603994 1649 ntBASIC19.18■□□□□ 0.66
FBXO28Q9NVF7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 KRT8P39-201ENST00000396270 1433 ntBASIC19.17■□□□□ 0.66
FBXO28Q9NVF7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FBXO28Q9NVF7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.15■□□□□ 0.66
FBXO28Q9NVF7 SPDYE12P-201ENST00000618416 771 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms