Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 AC006277.1-201ENST00000624348 1610 ntBASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 AP002383.4-201ENST00000442518 975 ntBASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 PRYP5-201ENST00000451909 266 ntBASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 AP002414.4-201ENST00000589764 1148 ntBASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 TERC-201ENST00000602385 541 ntBASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOMER3Q9NSC5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 LINC00265-3P-201ENST00000447588 903 ntBASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 TSPY26P-202ENST00000565928 3884 ntBASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.54■□□□□ 0.4
HOMER3Q9NSC5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 AL662844.4-201ENST00000606367 2838 ntBASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOMER3Q9NSC5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms