Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TSSC2-201ENST00000450217 709 ntBASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TERC-201ENST00000602385 541 ntBASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PKD1P5-201ENST00000532415 10291 ntBASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 AC005332.1-201ENST00000577698 1310 ntBASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AC105917.1-201ENST00000506637 2539 ntBASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AC132872.4-202ENST00000622924 2756 ntBASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AC243591.1-201ENST00000452967 1364 ntBASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AL031133.1-201ENST00000406807 723 ntBASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 TPSP2-201ENST00000561760 610 ntBASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 RN7SL850P-201ENST00000579959 291 ntBASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AC114341.1-201ENST00000618070 349 ntBASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AC073592.4-201ENST00000623827 446 ntBASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE2Q9NRR3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
CDC42SE2Q9NRR3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CDC42SE2Q9NRR3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.58□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms