Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 AC087641.1-201ENST00000557561 1021 ntBASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 PCDHA12-202ENST00000613593 2588 ntBASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 AC023274.1-201ENST00000418278 595 ntBASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRDM9Q9NQV7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AGGF1P2-201ENST00000426656 2106 ntBASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AC025580.3-201ENST00000617932 1424 ntBASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AC004832.2-201ENST00000426397 482 ntBASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 KRT19P2-202ENST00000557173 1012 ntBASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms