Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 AC087641.1-201ENST00000557561 1021 ntBASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 AP002472.1-201ENST00000577490 586 ntBASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 MPDU1-223ENST00000582151 728 ntBASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 MIR4469-201ENST00000583919 79 ntBASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKKSQ9NPJ1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 HMGA1P7-201ENST00000406908 502 ntBASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 AC134684.3-201ENST00000641758 218 ntBASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 AC131009.4-201ENST00000624048 1740 ntBASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.88■□□□□ 0.13
MKKSQ9NPJ1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 AC022211.2-201ENST00000585075 2527 ntBASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
MKKSQ9NPJ1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms