Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC4Q9HBW1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 BX842568.4-201ENST00000421222 227 ntBASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 MTDHP5-201ENST00000598980 586 ntBASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 AC068137.2-201ENST00000605408 478 ntBASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC4Q9HBW1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 YBX2P1-201ENST00000394192 760 ntBASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRRC4Q9HBW1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms