Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 BX005266.1-201ENST00000473402 457 ntBASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 TP73-AS1-207ENST00000624167 988 ntBASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 AC092068.3-201ENST00000587894 2016 ntBASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 AC093909.1-201ENST00000504731 1122 ntBASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 OR7E14P-202ENST00000530490 1290 ntBASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 TSPY26P-202ENST00000565928 3884 ntBASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 AC148477.5-201ENST00000625164 1645 ntBASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 AL135999.2-201ENST00000622438 1686 ntBASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 AC105917.1-201ENST00000506637 2539 ntBASIC16.4■□□□□ 0.22
CLK4Q9HAZ1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
CLK4Q9HAZ1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.39■□□□□ 0.22
CLK4Q9HAZ1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 PGM5P2-202ENST00000637225 1043 ntBASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLK4Q9HAZ1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms