Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 MIR346-201ENST00000362234 95 ntBASIC19.5■□□□□ 0.71
SH2D4AQ9H788 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 SPDYE14P-201ENST00000442619 822 ntBASIC19.5■□□□□ 0.71
SH2D4AQ9H788 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 RNA5SP421-201ENST00000516864 134 ntBASIC19.5■□□□□ 0.71
SH2D4AQ9H788 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.5■□□□□ 0.71
SH2D4AQ9H788 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 AC009053.2-201ENST00000563701 2365 ntBASIC19.5■□□□□ 0.71
SH2D4AQ9H788 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 PKD1P1-201ENST00000458669 6805 ntBASIC19.5■□□□□ 0.71
SH2D4AQ9H788 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SH2D4AQ9H788 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 BCRP1-201ENST00000444246 691 ntBASIC19.49■□□□□ 0.71
SH2D4AQ9H788 AC125807.1-201ENST00000483097 614 ntBASIC19.49■□□□□ 0.71
SH2D4AQ9H788 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 AC005498.2-205ENST00000593218 784 ntBASIC19.49■□□□□ 0.71
SH2D4AQ9H788 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D4AQ9H788 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 AC107890.1-201ENST00000422478 521 ntBASIC19.48■□□□□ 0.71
SH2D4AQ9H788 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.48■□□□□ 0.71
SH2D4AQ9H788 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms