Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 FLJ38576-201ENST00000623820 2459 ntBASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 RNF216P1-203ENST00000404404 2427 ntBASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 AL596257.1-201ENST00000641463 2694 ntBASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 PCDHA14-201ENST00000506751 2298 ntBASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 TERC-201ENST00000602385 541 ntBASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 AC078925.2-201ENST00000624013 1973 ntBASIC16.88■□□□□ 0.29
CCDC68Q9H2F9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 AKR1C7P-201ENST00000305623 895 ntBASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 AC006557.2-201ENST00000592985 1240 ntBASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC68Q9H2F9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms