Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 AL512652.2-201ENST00000625156 1716 ntBASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 KRT8P39-201ENST00000396270 1433 ntBASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 AC079328.2-201ENST00000561241 3354 ntBASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 AL603832.2-201ENST00000566195 2125 ntBASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 C8orf49-201ENST00000525043 1968 ntBASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHACTR1Q9C0D0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 LINC00265-3P-201ENST00000447588 903 ntBASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 POU5F1P6-201ENST00000466990 990 ntBASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 AC012615.1-201ENST00000565797 1299 ntBASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 AC091167.2-201ENST00000579581 588 ntBASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 MPDU1-223ENST00000582151 728 ntBASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 AC006449.6-201ENST00000612330 2296 ntBASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms