Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 AC092337.1-201ENST00000568699 1129 ntBASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 AC093726.1-201ENST00000608064 963 ntBASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 AL109936.8-201ENST00000641772 604 ntBASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 AC092053.1-201ENST00000605787 1936 ntBASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 NOC2LP1-202ENST00000452600 2235 ntBASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP4Q9C0A0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 MIR4259-201ENST00000584466 101 ntBASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP4Q9C0A0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CNTNAP4Q9C0A0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP4Q9C0A0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP4Q9C0A0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP4Q9C0A0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.83■□□□□ 0.92
CNTNAP4Q9C0A0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.83■□□□□ 0.92
CNTNAP4Q9C0A0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP4Q9C0A0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP4Q9C0A0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 RRP7BP-205ENST00000566851 833 ntBASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 MIR6069-201ENST00000620069 79 ntBASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 AL033527.4-201ENST00000641026 673 ntBASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTNAP4Q9C0A0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms