Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMOQ99835 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMOQ99835 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.54■□□□□ 0.4
SMOQ99835 AC006538.1-201ENST00000567905 1585 ntBASIC17.54■□□□□ 0.4
SMOQ99835 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SMOQ99835 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.54■□□□□ 0.4
SMOQ99835 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.54■□□□□ 0.4
SMOQ99835 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.54■□□□□ 0.4
SMOQ99835 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.54■□□□□ 0.4
SMOQ99835 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 SPCS2P4-201ENST00000436160 681 ntBASIC17.54■□□□□ 0.4
SMOQ99835 RN7SL589P-201ENST00000481268 310 ntBASIC17.54■□□□□ 0.4
SMOQ99835 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SMOQ99835 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.54■□□□□ 0.4
SMOQ99835 AC093520.2-201ENST00000561830 333 ntBASIC17.54■□□□□ 0.4
SMOQ99835 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
SMOQ99835 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SMOQ99835 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.54■□□□□ 0.4
SMOQ99835 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMOQ99835 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.54■□□□□ 0.4
SMOQ99835 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SMOQ99835 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.53■□□□□ 0.4
SMOQ99835 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.53■□□□□ 0.4
SMOQ99835 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SMOQ99835 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.53■□□□□ 0.4
SMOQ99835 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMOQ99835 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.53■□□□□ 0.4
SMOQ99835 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.53■□□□□ 0.4
SMOQ99835 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMOQ99835 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SMOQ99835 LINC01225-203ENST00000563550 1244 ntBASIC17.53■□□□□ 0.4
SMOQ99835 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.53■□□□□ 0.4
SMOQ99835 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.53■□□□□ 0.4
SMOQ99835 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.53■□□□□ 0.4
SMOQ99835 AC004835.2-201ENST00000603762 682 ntBASIC17.53■□□□□ 0.4
SMOQ99835 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMOQ99835 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SMOQ99835 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.52■□□□□ 0.4
SMOQ99835 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.52■□□□□ 0.4
SMOQ99835 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.52■□□□□ 0.4
SMOQ99835 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMOQ99835 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMOQ99835 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.52■□□□□ 0.4
SMOQ99835 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SMOQ99835 AL592309.1-201ENST00000443127 649 ntBASIC17.52■□□□□ 0.4
SMOQ99835 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.52■□□□□ 0.4
SMOQ99835 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.52■□□□□ 0.4
SMOQ99835 AL138918.1-201ENST00000568306 659 ntBASIC17.52■□□□□ 0.4
SMOQ99835 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.52■□□□□ 0.4
SMOQ99835 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMOQ99835 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.52■□□□□ 0.4
SMOQ99835 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SMOQ99835 AD000864.1-201ENST00000624076 2295 ntBASIC17.52■□□□□ 0.4
SMOQ99835 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.52■□□□□ 0.39
SMOQ99835 AL031731.1-201ENST00000642131 2094 ntBASIC17.52■□□□□ 0.39
SMOQ99835 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms