Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.27■□□□□ 0.35
CDX2Q99626 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDX2Q99626 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.27■□□□□ 0.35
CDX2Q99626 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDX2Q99626 LYSMD4-203ENST00000378904 2122 ntBASIC17.27■□□□□ 0.35
CDX2Q99626 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDX2Q99626 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDX2Q99626 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.27■□□□□ 0.35
CDX2Q99626 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.26■□□□□ 0.35
CDX2Q99626 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.26■□□□□ 0.35
CDX2Q99626 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CDX2Q99626 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDX2Q99626 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 AC091046.1-201ENST00000331871 207 ntBASIC17.26■□□□□ 0.35
CDX2Q99626 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDX2Q99626 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDX2Q99626 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 AC016694.1-201ENST00000434179 700 ntBASIC17.26■□□□□ 0.35
CDX2Q99626 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.26■□□□□ 0.35
CDX2Q99626 SCARNA20.5-201ENST00000516991 142 ntBASIC17.26■□□□□ 0.35
CDX2Q99626 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.26■□□□□ 0.35
CDX2Q99626 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.26■□□□□ 0.35
CDX2Q99626 AL008638.5-201ENST00000623814 1298 ntBASIC17.26■□□□□ 0.35
CDX2Q99626 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
CDX2Q99626 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.26■□□□□ 0.35
CDX2Q99626 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.26■□□□□ 0.35
CDX2Q99626 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDX2Q99626 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CDX2Q99626 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDX2Q99626 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX2Q99626 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDX2Q99626 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
CDX2Q99626 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX2Q99626 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX2Q99626 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.25■□□□□ 0.35
CDX2Q99626 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.25■□□□□ 0.35
CDX2Q99626 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.25■□□□□ 0.35
CDX2Q99626 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.25■□□□□ 0.35
CDX2Q99626 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX2Q99626 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CDX2Q99626 AC024267.1-201ENST00000582320 895 ntBASIC17.25■□□□□ 0.35
CDX2Q99626 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDX2Q99626 RHOXF1P1-202ENST00000635473 501 ntBASIC17.25■□□□□ 0.35
CDX2Q99626 AC008687.7-202ENST00000637404 953 ntBASIC17.25■□□□□ 0.35
CDX2Q99626 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CDX2Q99626 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.25■□□□□ 0.35
CDX2Q99626 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDX2Q99626 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDX2Q99626 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX2Q99626 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.24■□□□□ 0.35
CDX2Q99626 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDX2Q99626 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX2Q99626 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.24■□□□□ 0.35
CDX2Q99626 KRT8P49-201ENST00000604166 1432 ntBASIC17.24■□□□□ 0.35
CDX2Q99626 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX2Q99626 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX2Q99626 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDX2Q99626 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDX2Q99626 MIR33B-201ENST00000385104 96 ntBASIC17.24■□□□□ 0.35
CDX2Q99626 RPL17P11-201ENST00000417593 544 ntBASIC17.24■□□□□ 0.35
CDX2Q99626 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.24■□□□□ 0.35
CDX2Q99626 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.24■□□□□ 0.35
CDX2Q99626 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX2Q99626 AL359711.2-201ENST00000563105 872 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms