Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 SPCS2P1-201ENST00000561636 679 ntBASIC18.15■□□□□ 0.5
PGBD4Q96DM1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 AC027307.2-201ENST00000591252 911 ntBASIC18.15■□□□□ 0.5
PGBD4Q96DM1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 CROCCP2-202ENST00000412962 2773 ntBASIC18.15■□□□□ 0.5
PGBD4Q96DM1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 PP12613-201ENST00000424958 2230 ntBASIC18.15■□□□□ 0.5
PGBD4Q96DM1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 AC016027.1-202ENST00000607927 1699 ntBASIC18.15■□□□□ 0.5
PGBD4Q96DM1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD4Q96DM1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PGBD4Q96DM1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PGBD4Q96DM1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PGBD4Q96DM1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
PGBD4Q96DM1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.14■□□□□ 0.5
PGBD4Q96DM1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PGBD4Q96DM1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 SPDYE7P-202ENST00000420373 878 ntBASIC18.14■□□□□ 0.49
PGBD4Q96DM1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.14■□□□□ 0.49
PGBD4Q96DM1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 AC108860.2-201ENST00000562760 2183 ntBASIC18.14■□□□□ 0.49
PGBD4Q96DM1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD4Q96DM1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 AC026150.2-201ENST00000564693 1156 ntBASIC18.13■□□□□ 0.49
PGBD4Q96DM1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 AL096865.1-201ENST00000606796 927 ntBASIC18.13■□□□□ 0.49
PGBD4Q96DM1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 TUBB3P1-201ENST00000405796 1332 ntBASIC18.13■□□□□ 0.49
PGBD4Q96DM1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD4Q96DM1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 AC020916.1-201ENST00000587762 1774 ntBASIC18.12■□□□□ 0.49
PGBD4Q96DM1 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.12■□□□□ 0.49
PGBD4Q96DM1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms