Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 TNRC18P3-201ENST00000441896 2691 ntBASIC17.3■□□□□ 0.36
HDAC11Q96DB2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 AC108073.2-201ENST00000464002 357 ntBASIC17.3■□□□□ 0.36
HDAC11Q96DB2 AC092910.1-201ENST00000482027 1129 ntBASIC17.3■□□□□ 0.36
HDAC11Q96DB2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 AP001005.1-201ENST00000571755 1248 ntBASIC17.3■□□□□ 0.36
HDAC11Q96DB2 AC091167.2-201ENST00000579581 588 ntBASIC17.3■□□□□ 0.36
HDAC11Q96DB2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 AL139011.1-202ENST00000642063 584 ntBASIC17.3■□□□□ 0.36
HDAC11Q96DB2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC11Q96DB2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 HLA-A-202ENST00000376806 1854 ntBASIC17.29■□□□□ 0.36
HDAC11Q96DB2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 AC129492.6-201ENST00000611383 1305 ntBASIC17.29■□□□□ 0.36
HDAC11Q96DB2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 AC009078.2-202ENST00000463353 338 ntBASIC17.29■□□□□ 0.36
HDAC11Q96DB2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 MPDU1-223ENST00000582151 728 ntBASIC17.29■□□□□ 0.36
HDAC11Q96DB2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC11Q96DB2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 MRPL20P1-201ENST00000400819 433 ntBASIC17.28■□□□□ 0.36
HDAC11Q96DB2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC11Q96DB2 AC098831.1-202ENST00000438821 336 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms