Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 BX276092.5-203ENST00000456199 560 ntBASIC16.2■□□□□ 0.18
VPS33AQ96AX1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 AC016734.2-201ENST00000624325 1377 ntBASIC16.2■□□□□ 0.18
VPS33AQ96AX1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 ME2P1-201ENST00000426028 1970 ntBASIC16.19■□□□□ 0.18
VPS33AQ96AX1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.19■□□□□ 0.18
VPS33AQ96AX1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 ACTG1P4-201ENST00000425123 1122 ntBASIC16.19■□□□□ 0.18
VPS33AQ96AX1 SIGLEC30P-201ENST00000455569 941 ntBASIC16.19■□□□□ 0.18
VPS33AQ96AX1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 AL121672.3-201ENST00000608644 468 ntBASIC16.19■□□□□ 0.18
VPS33AQ96AX1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS33AQ96AX1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 AC004817.3-201ENST00000602957 2129 ntBASIC16.18■□□□□ 0.18
VPS33AQ96AX1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 AC233702.3-201ENST00000578656 1387 ntBASIC16.18■□□□□ 0.18
VPS33AQ96AX1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 LINC00895-201ENST00000629028 1637 ntBASIC16.18■□□□□ 0.18
VPS33AQ96AX1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 AC097637.2-201ENST00000624096 1997 ntBASIC16.18■□□□□ 0.18
VPS33AQ96AX1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms