Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MIR7845-201ENST00000618396 99 ntBASIC14.43□□□□□ -0.1
USP9XQ93008 AP001350.2-201ENST00000625104 1094 ntBASIC14.43□□□□□ -0.1
USP9XQ93008 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
USP9XQ93008 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
USP9XQ93008 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USP9XQ93008 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.43□□□□□ -0.1
USP9XQ93008 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
USP9XQ93008 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
USP9XQ93008 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.43□□□□□ -0.1
USP9XQ93008 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USP9XQ93008 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USP9XQ93008 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.43□□□□□ -0.1
USP9XQ93008 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.42□□□□□ -0.1
USP9XQ93008 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.42□□□□□ -0.1
USP9XQ93008 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.42□□□□□ -0.1
USP9XQ93008 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.42□□□□□ -0.1
USP9XQ93008 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.42□□□□□ -0.1
USP9XQ93008 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
USP9XQ93008 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 AC021097.1-201ENST00000607902 574 ntBASIC14.42□□□□□ -0.1
USP9XQ93008 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.42□□□□□ -0.1
USP9XQ93008 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC14.42□□□□□ -0.1
USP9XQ93008 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
USP9XQ93008 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.42□□□□□ -0.1
USP9XQ93008 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.42□□□□□ -0.1
USP9XQ93008 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
USP9XQ93008 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.42□□□□□ -0.1
USP9XQ93008 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.42□□□□□ -0.1
USP9XQ93008 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
USP9XQ93008 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.42□□□□□ -0.1
USP9XQ93008 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.42□□□□□ -0.1
USP9XQ93008 MIR5189-201ENST00000577370 114 ntBASIC14.42□□□□□ -0.1
USP9XQ93008 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.42□□□□□ -0.1
USP9XQ93008 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
USP9XQ93008 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
USP9XQ93008 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.42□□□□□ -0.1
USP9XQ93008 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
USP9XQ93008 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.41□□□□□ -0.1
USP9XQ93008 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.41□□□□□ -0.1
USP9XQ93008 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 SPDYE17-201ENST00000412399 783 ntBASIC14.41□□□□□ -0.1
USP9XQ93008 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.41□□□□□ -0.1
USP9XQ93008 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.41□□□□□ -0.1
USP9XQ93008 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 AC114501.1-201ENST00000445949 172 ntBASIC14.41□□□□□ -0.1
USP9XQ93008 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.41□□□□□ -0.1
USP9XQ93008 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.41□□□□□ -0.1
USP9XQ93008 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.41□□□□□ -0.1
USP9XQ93008 MIR5572-201ENST00000583188 137 ntBASIC14.41□□□□□ -0.1
USP9XQ93008 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.41□□□□□ -0.1
USP9XQ93008 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.41□□□□□ -0.1
USP9XQ93008 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.41□□□□□ -0.1
USP9XQ93008 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USP9XQ93008 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.4□□□□□ -0.1
USP9XQ93008 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.4□□□□□ -0.1
USP9XQ93008 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.4□□□□□ -0.1
USP9XQ93008 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.4□□□□□ -0.1
USP9XQ93008 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
USP9XQ93008 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USP9XQ93008 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.4□□□□□ -0.1
USP9XQ93008 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.4□□□□□ -0.1
USP9XQ93008 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.4□□□□□ -0.1
USP9XQ93008 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.4□□□□□ -0.1
USP9XQ93008 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USP9XQ93008 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USP9XQ93008 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
USP9XQ93008 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.4□□□□□ -0.1
USP9XQ93008 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms