Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
ATL1Q8WXF7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 AP002414.3-201ENST00000589352 1468 ntBASIC16.43■□□□□ 0.22
ATL1Q8WXF7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 NFIC-211ENST00000641145 8399 ntBASIC16.43■□□□□ 0.22
ATL1Q8WXF7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 MRPL20P1-201ENST00000400819 433 ntBASIC16.43■□□□□ 0.22
ATL1Q8WXF7 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.43■□□□□ 0.22
ATL1Q8WXF7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.43■□□□□ 0.22
ATL1Q8WXF7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 HLA-J-202ENST00000469281 1241 ntBASIC16.43■□□□□ 0.22
ATL1Q8WXF7 SLC25A6P2-201ENST00000497974 877 ntBASIC16.43■□□□□ 0.22
ATL1Q8WXF7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATL1Q8WXF7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 PCDH8P1-201ENST00000428983 2773 ntBASIC16.42■□□□□ 0.22
ATL1Q8WXF7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 AC012640.2-201ENST00000561606 901 ntBASIC16.42■□□□□ 0.22
ATL1Q8WXF7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 AC005412.3-201ENST00000580309 715 ntBASIC16.42■□□□□ 0.22
ATL1Q8WXF7 MPDU1-223ENST00000582151 728 ntBASIC16.42■□□□□ 0.22
ATL1Q8WXF7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 RNF216P1-203ENST00000404404 2427 ntBASIC16.42■□□□□ 0.22
ATL1Q8WXF7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATL1Q8WXF7 AL353732.1-201ENST00000569618 1459 ntBASIC16.42■□□□□ 0.22
ATL1Q8WXF7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms