Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 BTBD7P1-201ENST00000447253 1453 ntBASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 AC104794.3-201ENST00000566840 1248 ntBASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 GGT3P-204ENST00000453783 1664 ntBASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CASKIN1Q8WXD9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 RN7SL692P-201ENST00000464677 288 ntBASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CASKIN1Q8WXD9 KRT8P12-202ENST00000472924 1397 ntBASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 API5-211ENST00000534695 560 ntTSL 5 BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 AL596325.1-201ENST00000563991 1082 ntBASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASKIN1Q8WXD9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 RN7SL618P-201ENST00000477850 296 ntBASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASKIN1Q8WXD9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms