Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 GGT4P-201ENST00000623672 1708 ntBASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 AC002310.6-201ENST00000624451 1377 ntBASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 MIR5100-201ENST00000579544 119 ntBASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 MIR4492-201ENST00000581627 80 ntBASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 AL031731.1-201ENST00000642131 2094 ntBASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC44A1Q8WWI5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 AC104819.1-201ENST00000504587 486 ntBASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 AL596257.1-201ENST00000641463 2694 ntBASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC44A1Q8WWI5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC44A1Q8WWI5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC44A1Q8WWI5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SLC44A1Q8WWI5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC44A1Q8WWI5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC44A1Q8WWI5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms