Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 RNU1-129P-201ENST00000384064 167 ntBASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 ADH5P3-201ENST00000433842 1137 ntBASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 U1.21-201ENST00000580816 167 ntBASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 AL390955.2-201ENST00000603032 514 ntBASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 HLA-A-202ENST00000376806 1854 ntBASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-3Q8TAU0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.75
NKX2-3Q8TAU0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
NKX2-3Q8TAU0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NKX2-3Q8TAU0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NKX2-3Q8TAU0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 AC140658.5-201ENST00000438532 169 ntBASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 AC068137.2-201ENST00000605408 478 ntBASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 AC005052.1-201ENST00000625181 2492 ntBASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-3Q8TAU0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 AC236430.1-201ENST00000402231 743 ntBASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 AC002472.2-201ENST00000442739 958 ntBASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 AL645728.2-201ENST00000641974 660 ntBASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NKX2-3Q8TAU0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 CNN2P2-201ENST00000443536 909 ntBASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 CNN2P3-201ENST00000450201 906 ntBASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 DUX4L27-201ENST00000554796 1261 ntBASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NKX2-3Q8TAU0 AL136317.3-201ENST00000618497 906 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms