Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 MIR1909-201ENST00000411312 80 ntBASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 RPS2P32-201ENST00000439199 892 ntBASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 AC093724.1-201ENST00000448659 1027 ntBASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 AL033527.5-202ENST00000641632 1098 ntBASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 AC007613.1-201ENST00000572811 2597 ntBASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.3■□□□□ 0.52
KLHDC9Q8NEP7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 SERBP1P3-201ENST00000459980 809 ntBASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AC055876.2-201ENST00000531834 546 ntBASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 KRT17P8-201ENST00000540749 863 ntBASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AC061975.2-201ENST00000581722 295 ntBASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AC007431.3-201ENST00000623221 587 ntBASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHDC9Q8NEP7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 AC092053.1-201ENST00000605787 1936 ntBASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 AC024267.1-201ENST00000582320 895 ntBASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHDC9Q8NEP7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms