Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC16Q8NEE8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.64■□□□□ 0.42
TTC16Q8NEE8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TTC16Q8NEE8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TTC16Q8NEE8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 TSEN15P1-201ENST00000423257 515 ntBASIC17.64■□□□□ 0.41
TTC16Q8NEE8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 ACTG1P14-201ENST00000446382 1122 ntBASIC17.64■□□□□ 0.41
TTC16Q8NEE8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 AC107918.2-201ENST00000530817 355 ntBASIC17.64■□□□□ 0.41
TTC16Q8NEE8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 AC004835.2-201ENST00000603762 682 ntBASIC17.64■□□□□ 0.41
TTC16Q8NEE8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.64■□□□□ 0.41
TTC16Q8NEE8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 AC004461.1-201ENST00000412461 403 ntBASIC17.63■□□□□ 0.41
TTC16Q8NEE8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 GNAS-203ENST00000306120 1878 ntBASIC17.63■□□□□ 0.41
TTC16Q8NEE8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.63■□□□□ 0.41
TTC16Q8NEE8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC16Q8NEE8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms