Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 AC069120.2-201ENST00000524091 540 ntBASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 PKD1P1-201ENST00000458669 6805 ntBASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COLGALT1Q8NBJ5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 AC012313.1-201ENST00000593393 3059 ntBASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 MIR3909-201ENST00000579518 119 ntBASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 AL035252.4-201ENST00000624174 288 ntBASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLGALT1Q8NBJ5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 MIR346-201ENST00000362234 95 ntBASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 AC005034.1-201ENST00000426657 489 ntBASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 FAM207CP-201ENST00000443486 507 ntBASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 AC097493.3-201ENST00000509725 367 ntBASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLGALT1Q8NBJ5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms