Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 PMS2P4-201ENST00000412466 1052 ntBASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 MCCD1P2-201ENST00000423228 335 ntBASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 AC002347.1-201ENST00000569543 541 ntBASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 MIR3909-201ENST00000579518 119 ntBASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 AC068137.2-201ENST00000605408 478 ntBASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 AL031731.1-201ENST00000642131 2094 ntBASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 AC092474.2-201ENST00000424288 719 ntBASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 AL009183.1-201ENST00000603760 355 ntBASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC4Q8N9L1 GGT4P-201ENST00000623672 1708 ntBASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 PCDHA14-201ENST00000506751 2298 ntBASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 AC109635.5-201ENST00000533593 962 ntBASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC4Q8N9L1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms