Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 YBX1P5-201ENST00000509441 847 ntBASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 AL512652.2-201ENST00000625156 1716 ntBASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 ELL2P1-201ENST00000413990 1906 ntBASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAM1L1Q8N609 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 HLA-A-202ENST00000376806 1854 ntBASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 PRORSD1P-202ENST00000563365 2154 ntBASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.54■□□□□ 0.24
TRAM1L1Q8N609 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms