Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 AL356488.2-201ENST00000602755 427 ntBASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 REXO1L3P-201ENST00000622202 1288 ntBASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 AC005593.1-201ENST00000624894 515 ntBASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 AL139011.1-202ENST00000642063 584 ntBASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TTC9CQ8N5M4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 HLA-J-202ENST00000469281 1241 ntBASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 SLC25A6P2-201ENST00000497974 877 ntBASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 IGHV3-65-201ENST00000523210 341 ntBASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 AL160237.2-201ENST00000556165 472 ntBASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 AC104692.2-201ENST00000603054 253 ntBASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 AL031008.1-201ENST00000619963 541 ntBASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 AC129492.6-201ENST00000611383 1305 ntBASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TTC9CQ8N5M4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.29□□□□□ -0.28
TTC9CQ8N5M4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms