Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 KRT18P2-201ENST00000447938 1258 ntBASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 AC005829.1-201ENST00000570002 483 ntBASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 AC004706.3-202ENST00000621574 984 ntBASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FBXO39Q8N4B4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 MCCD1P2-201ENST00000423228 335 ntBASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 AL596442.2-201ENST00000610240 980 ntBASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FBXO39Q8N4B4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 MIR4751-201ENST00000578027 74 ntBASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.79■□□□□ 0.28
FBXO39Q8N4B4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FBXO39Q8N4B4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FBXO39Q8N4B4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FBXO39Q8N4B4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FBXO39Q8N4B4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FBXO39Q8N4B4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FBXO39Q8N4B4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms