Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 SPCS2P4-201ENST00000436160 681 ntBASIC17.03■□□□□ 0.32
PGBD3Q8N328 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 KLF2P3-201ENST00000451977 1087 ntBASIC17.03■□□□□ 0.32
PGBD3Q8N328 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 AC125807.1-201ENST00000483097 614 ntBASIC17.03■□□□□ 0.32
PGBD3Q8N328 AC015911.4-201ENST00000588022 1070 ntBASIC17.03■□□□□ 0.32
PGBD3Q8N328 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 AL390955.2-201ENST00000603032 514 ntBASIC17.03■□□□□ 0.32
PGBD3Q8N328 AL009183.1-201ENST00000603760 355 ntBASIC17.03■□□□□ 0.32
PGBD3Q8N328 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 FZD10-202ENST00000539839 3282 ntBASIC17.03■□□□□ 0.32
PGBD3Q8N328 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD3Q8N328 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD3Q8N328 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AL355312.1-201ENST00000407115 2176 ntBASIC17.02■□□□□ 0.32
PGBD3Q8N328 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD3Q8N328 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD3Q8N328 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AC055876.3-201ENST00000431496 288 ntBASIC17.02■□□□□ 0.32
PGBD3Q8N328 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AC138649.4-201ENST00000612222 287 ntBASIC17.02■□□□□ 0.32
PGBD3Q8N328 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.02■□□□□ 0.32
PGBD3Q8N328 AP001059.3-201ENST00000619053 235 ntBASIC17.02■□□□□ 0.32
PGBD3Q8N328 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD3Q8N328 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD3Q8N328 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD3Q8N328 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD3Q8N328 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD3Q8N328 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PGBD3Q8N328 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 PP12613-201ENST00000424958 2230 ntBASIC17.01■□□□□ 0.31
PGBD3Q8N328 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms