Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 AC012313.1-201ENST00000593393 3059 ntBASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 AC005237.2-201ENST00000434368 219 ntBASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 AL592309.1-201ENST00000443127 649 ntBASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 AC079140.1-201ENST00000508039 487 ntBASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 AC109635.5-201ENST00000533593 962 ntBASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
SCN4BQ8IWT1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 PMS2P4-201ENST00000412466 1052 ntBASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 TSEN15P1-201ENST00000423257 515 ntBASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 RN7SL589P-201ENST00000481268 310 ntBASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SCN4BQ8IWT1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 AC243562.1-201ENST00000560672 389 ntBASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 AC027796.2-201ENST00000575326 344 ntBASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms