Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 AC245100.3-201ENST00000441281 285 ntBASIC17.81■□□□□ 0.44
RNF135Q8IUD6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 AC026150.2-201ENST00000564693 1156 ntBASIC17.81■□□□□ 0.44
RNF135Q8IUD6 AL135744.1-201ENST00000565098 629 ntBASIC17.81■□□□□ 0.44
RNF135Q8IUD6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 MIR6799-201ENST00000620297 69 ntBASIC17.81■□□□□ 0.44
RNF135Q8IUD6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SPDYE7P-202ENST00000420373 878 ntBASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 IGHV3-52-201ENST00000519770 353 ntBASIC17.8■□□□□ 0.44
RNF135Q8IUD6 AC069120.2-201ENST00000524091 540 ntBASIC17.8■□□□□ 0.44
RNF135Q8IUD6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 AC139713.2-201ENST00000641328 2723 ntBASIC17.8■□□□□ 0.44
RNF135Q8IUD6 PP12613-201ENST00000424958 2230 ntBASIC17.8■□□□□ 0.44
RNF135Q8IUD6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF135Q8IUD6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 AL590787.1-201ENST00000568856 1315 ntBASIC17.79■□□□□ 0.44
RNF135Q8IUD6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 KRT17P7-201ENST00000451704 1104 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms