Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL138781.2-201ENST00000617896 1843 ntBASIC20.78■□□□□ 0.92
COL23A1Q86Y22 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 TUBB1P2-201ENST00000422712 1306 ntBASIC20.78■□□□□ 0.92
COL23A1Q86Y22 TUBB1P1-201ENST00000503144 1300 ntBASIC20.78■□□□□ 0.92
COL23A1Q86Y22 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 CLK3P2-201ENST00000427566 1453 ntBASIC20.77■□□□□ 0.92
COL23A1Q86Y22 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 KRT43P-201ENST00000434019 910 ntBASIC20.77■□□□□ 0.92
COL23A1Q86Y22 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 AC103810.3-201ENST00000583567 96 ntBASIC20.77■□□□□ 0.92
COL23A1Q86Y22 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.77■□□□□ 0.92
COL23A1Q86Y22 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.77■□□□□ 0.91
COL23A1Q86Y22 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COL23A1Q86Y22 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL23A1Q86Y22 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL23A1Q86Y22 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 AL355994.2-201ENST00000447882 704 ntBASIC20.76■□□□□ 0.91
COL23A1Q86Y22 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 AC108725.1-201ENST00000495472 409 ntBASIC20.76■□□□□ 0.91
COL23A1Q86Y22 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 AC233724.13-201ENST00000598383 410 ntBASIC20.76■□□□□ 0.91
COL23A1Q86Y22 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL23A1Q86Y22 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 SLC25A47P1-201ENST00000531577 414 ntBASIC20.75■□□□□ 0.91
COL23A1Q86Y22 AC061975.2-201ENST00000581722 295 ntBASIC20.75■□□□□ 0.91
COL23A1Q86Y22 MIR6069-201ENST00000620069 79 ntBASIC20.75■□□□□ 0.91
COL23A1Q86Y22 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL23A1Q86Y22 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 BRWD1P1-201ENST00000401091 371 ntBASIC20.74■□□□□ 0.91
COL23A1Q86Y22 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms