Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 AC091917.2-201ENST00000505002 744 ntBASIC16.97■□□□□ 0.31
PACS2Q86VP3 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 LINC01451-201ENST00000623792 534 ntBASIC16.97■□□□□ 0.31
PACS2Q86VP3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PACS2Q86VP3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PACS2Q86VP3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.96■□□□□ 0.31
PACS2Q86VP3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 SEC1P-202ENST00000473944 940 ntBASIC16.96■□□□□ 0.31
PACS2Q86VP3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 AC104390.1-201ENST00000555663 520 ntBASIC16.96■□□□□ 0.31
PACS2Q86VP3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.96■□□□□ 0.31
PACS2Q86VP3 AC010491.1-201ENST00000563101 2797 ntBASIC16.96■□□□□ 0.31
PACS2Q86VP3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PACS2Q86VP3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PACS2Q86VP3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
PACS2Q86VP3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PACS2Q86VP3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.96■□□□□ 0.3
PACS2Q86VP3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PACS2Q86VP3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 AC009065.1-201ENST00000564055 1225 ntBASIC16.95■□□□□ 0.3
PACS2Q86VP3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms