Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
WDR88Q6ZMY6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 AC107918.4-202ENST00000641623 219 ntBASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 AL512652.2-201ENST00000625156 1716 ntBASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WDR88Q6ZMY6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 LAGE3P1-201ENST00000425356 484 ntBASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 KRT18P27-201ENST00000427733 1299 ntBASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 DUSP5P1-201ENST00000441325 1139 ntBASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 GGT3P-204ENST00000453783 1664 ntBASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 SLC22A20-204ENST00000530038 1673 ntBASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms