Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 MCCD1P2-201ENST00000423228 335 ntBASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 PDPK2P-202ENST00000562415 1191 ntBASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 AC055717.3-201ENST00000622967 595 ntBASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 AC007064.4-201ENST00000637740 555 ntBASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.52■□□□□ 0.39
RFWD3Q6PCD5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 DNAJB3-201ENST00000446806 729 ntBASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 DUX4L17-201ENST00000557360 1267 ntBASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFWD3Q6PCD5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 ALG1L5P-201ENST00000482043 771 ntBASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 MIR3687-2-201ENST00000577708 61 ntBASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 AL078644.1-201ENST00000609881 752 ntBASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 MIR3687-1-201ENST00000614492 61 ntBASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 AC092068.3-201ENST00000587894 2016 ntBASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 PKD1P1-201ENST00000458669 6805 ntBASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms