Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 AC073195.1-201ENST00000607241 877 ntBASIC12.74□□□□□ -0.37
MRPL54Q6P161 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 FAM45BP-202ENST00000592932 1624 ntBASIC12.73□□□□□ -0.37
MRPL54Q6P161 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 AP003041.3-201ENST00000527151 707 ntBASIC12.73□□□□□ -0.37
MRPL54Q6P161 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.73□□□□□ -0.37
MRPL54Q6P161 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL54Q6P161 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
MRPL54Q6P161 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 SNX18-202ENST00000343017 3140 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms