Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 NPAP1P7-201ENST00000613027 823 ntBASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 AC138894.3-201ENST00000603787 634 ntBASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP4R4Q6NUP7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 AC092384.3-202ENST00000564646 2873 ntBASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 AL365209.1-201ENST00000624418 6473 ntBASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 TPSP2-201ENST00000561760 610 ntBASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 CLEC4GP1-201ENST00000596555 870 ntBASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 AC023824.1-201ENST00000562945 2975 ntBASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP4R4Q6NUP7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PPP4R4Q6NUP7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
PPP4R4Q6NUP7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms