Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AJ011932.1-201ENST00000621707 465 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 TUBB8P12-201ENST00000308911 1335 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 TUBB7P-202ENST00000428444 1305 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 TUBB8P7-204ENST00000567960 1332 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 PCDHB17P-201ENST00000539533 2393 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 AC006277.1-201ENST00000624348 1610 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.05■□□□□ 0
RNFT1Q5M7Z0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 UGT1A2P-201ENST00000454886 866 ntBASIC15.05■□□□□ -0
RNFT1Q5M7Z0 INGX-202ENST00000489074 768 ntBASIC15.05■□□□□ -0
RNFT1Q5M7Z0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 FOXO1B-201ENST00000504678 1527 ntBASIC15.05■□□□□ -0
RNFT1Q5M7Z0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNFT1Q5M7Z0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 AC139713.2-201ENST00000641328 2723 ntBASIC15.04■□□□□ -0
RNFT1Q5M7Z0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 SNX33P1-201ENST00000592116 1762 ntBASIC15.04■□□□□ -0
RNFT1Q5M7Z0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 BASP1P1-201ENST00000430708 665 ntBASIC15.04■□□□□ -0
RNFT1Q5M7Z0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 KRT18P34-201ENST00000488218 1270 ntBASIC15.04■□□□□ -0
RNFT1Q5M7Z0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.04■□□□□ -0
RNFT1Q5M7Z0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.04■□□□□ -0
RNFT1Q5M7Z0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms