Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRFAM7AQ494W8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.77□□□□□ -0.05
CHRFAM7AQ494W8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 AP005117.1-201ENST00000584346 1413 ntBASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 AC004832.2-201ENST00000426397 482 ntBASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 DNAJB3-202ENST00000449667 1266 ntBASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 FLJ38576-201ENST00000623820 2459 ntBASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHRFAM7AQ494W8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 AL391005.1-201ENST00000623953 2435 ntBASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 AC211486.1-202ENST00000416371 468 ntBASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 AC211476.1-201ENST00000503899 468 ntBASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 SART3-203ENST00000546611 1184 ntBASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 MIR3197-201ENST00000582241 73 ntBASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 MTDHP5-201ENST00000598980 586 ntBASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRFAM7AQ494W8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms