Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.87■□□□□ 0.29
AP1S1P61966 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.87■□□□□ 0.29
AP1S1P61966 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.87■□□□□ 0.29
AP1S1P61966 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 AC106886.4-201ENST00000623557 2502 ntBASIC16.87■□□□□ 0.29
AP1S1P61966 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.86■□□□□ 0.29
AP1S1P61966 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
AP1S1P61966 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
AP1S1P61966 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.86■□□□□ 0.29
AP1S1P61966 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.86■□□□□ 0.29
AP1S1P61966 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 RNF216P1-203ENST00000404404 2427 ntBASIC16.86■□□□□ 0.29
AP1S1P61966 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP1S1P61966 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.86■□□□□ 0.29
AP1S1P61966 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.86■□□□□ 0.29
AP1S1P61966 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 RPSAP43-201ENST00000402237 625 ntBASIC16.86■□□□□ 0.29
AP1S1P61966 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.86■□□□□ 0.29
AP1S1P61966 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.86■□□□□ 0.29
AP1S1P61966 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.86■□□□□ 0.29
AP1S1P61966 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.86■□□□□ 0.29
AP1S1P61966 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
AP1S1P61966 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.86■□□□□ 0.29
AP1S1P61966 AC092902.6-201ENST00000641783 218 ntBASIC16.86■□□□□ 0.29
AP1S1P61966 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
AP1S1P61966 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.86■□□□□ 0.29
AP1S1P61966 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.86■□□□□ 0.29
AP1S1P61966 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
AP1S1P61966 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.86■□□□□ 0.29
AP1S1P61966 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP1S1P61966 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.86■□□□□ 0.29
AP1S1P61966 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP1S1P61966 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
AP1S1P61966 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 LTB4R2-202ENST00000528054 3092 ntBASIC16.85■□□□□ 0.29
AP1S1P61966 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.85■□□□□ 0.29
AP1S1P61966 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.85■□□□□ 0.29
AP1S1P61966 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.85■□□□□ 0.29
AP1S1P61966 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.85■□□□□ 0.29
AP1S1P61966 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.85■□□□□ 0.29
AP1S1P61966 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 YBX1P5-201ENST00000509441 847 ntBASIC16.85■□□□□ 0.29
AP1S1P61966 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.85■□□□□ 0.29
AP1S1P61966 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.85■□□□□ 0.29
AP1S1P61966 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.85■□□□□ 0.29
AP1S1P61966 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.85■□□□□ 0.29
AP1S1P61966 AC099522.2-201ENST00000607001 744 ntBASIC16.85■□□□□ 0.29
AP1S1P61966 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP1S1P61966 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.85■□□□□ 0.29
AP1S1P61966 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP1S1P61966 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
AP1S1P61966 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms