Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC010653.2-201ENST00000623505 997 ntBASIC11.86□□□□□ -0.51
CKS1BP61024 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
CKS1BP61024 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 AC126177.1-201ENST00000547829 2218 ntBASIC11.86□□□□□ -0.51
CKS1BP61024 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 GRK6P1-201ENST00000400595 1711 ntBASIC11.86□□□□□ -0.51
CKS1BP61024 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
CKS1BP61024 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.85□□□□□ -0.51
CKS1BP61024 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CKS1BP61024 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.85□□□□□ -0.51
CKS1BP61024 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
CKS1BP61024 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.85□□□□□ -0.51
CKS1BP61024 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.85□□□□□ -0.51
CKS1BP61024 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.85□□□□□ -0.51
CKS1BP61024 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.85□□□□□ -0.51
CKS1BP61024 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
CKS1BP61024 AC024243.1-201ENST00000609234 778 ntBASIC11.85□□□□□ -0.51
CKS1BP61024 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.85□□□□□ -0.51
CKS1BP61024 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CKS1BP61024 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CKS1BP61024 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS1BP61024 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
CKS1BP61024 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS1BP61024 AC118758.2-201ENST00000614242 2813 ntBASIC11.85□□□□□ -0.51
CKS1BP61024 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.85□□□□□ -0.51
CKS1BP61024 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.85□□□□□ -0.51
CKS1BP61024 AL139385.1-201ENST00000611744 3272 ntBASIC11.85□□□□□ -0.51
CKS1BP61024 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CKS1BP61024 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS1BP61024 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS1BP61024 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.84□□□□□ -0.51
CKS1BP61024 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CKS1BP61024 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 AC009949.1-201ENST00000623048 1830 ntBASIC11.84□□□□□ -0.51
CKS1BP61024 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 AC007663.1-201ENST00000438948 1240 ntBASIC11.84□□□□□ -0.51
CKS1BP61024 DDX43P3-201ENST00000441064 443 ntBASIC11.84□□□□□ -0.51
CKS1BP61024 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.84□□□□□ -0.51
CKS1BP61024 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.84□□□□□ -0.51
CKS1BP61024 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC11.84□□□□□ -0.51
CKS1BP61024 MIR4785-201ENST00000585005 73 ntBASIC11.84□□□□□ -0.51
CKS1BP61024 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC11.84□□□□□ -0.51
CKS1BP61024 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS1BP61024 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CKS1BP61024 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CKS1BP61024 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms