Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL596442.2-201ENST00000610240 980 ntBASIC21.92■■□□□ 1.1
RIPK4P57078 AC105339.1-204ENST00000636249 355 ntBASIC21.92■■□□□ 1.1
RIPK4P57078 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RIPK4P57078 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RIPK4P57078 AD000864.1-201ENST00000624076 2295 ntBASIC21.91■■□□□ 1.1
RIPK4P57078 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.91■■□□□ 1.1
RIPK4P57078 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
RIPK4P57078 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RIPK4P57078 PCDHA12-202ENST00000613593 2588 ntBASIC21.91■■□□□ 1.1
RIPK4P57078 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RIPK4P57078 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RIPK4P57078 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.91■■□□□ 1.1
RIPK4P57078 TFAMP1-201ENST00000412727 736 ntBASIC21.91■■□□□ 1.1
RIPK4P57078 KRT8P48-201ENST00000515599 1220 ntBASIC21.91■■□□□ 1.1
RIPK4P57078 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.91■■□□□ 1.1
RIPK4P57078 RARRES2P8-201ENST00000566335 367 ntBASIC21.91■■□□□ 1.1
RIPK4P57078 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.91■■□□□ 1.1
RIPK4P57078 AP001160.2-201ENST00000596071 487 ntBASIC21.91■■□□□ 1.1
RIPK4P57078 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.91■■□□□ 1.1
RIPK4P57078 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.91■■□□□ 1.1
RIPK4P57078 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.91■■□□□ 1.1
RIPK4P57078 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RIPK4P57078 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RIPK4P57078 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.91■■□□□ 1.1
RIPK4P57078 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.91■■□□□ 1.1
RIPK4P57078 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RIPK4P57078 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RIPK4P57078 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK4P57078 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.9■■□□□ 1.1
RIPK4P57078 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK4P57078 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.9■■□□□ 1.1
RIPK4P57078 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK4P57078 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK4P57078 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.9■■□□□ 1.1
RIPK4P57078 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.9■■□□□ 1.1
RIPK4P57078 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.9■■□□□ 1.1
RIPK4P57078 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK4P57078 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK4P57078 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK4P57078 AC026120.1-201ENST00000611536 926 ntBASIC21.9■■□□□ 1.1
RIPK4P57078 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK4P57078 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK4P57078 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RIPK4P57078 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.9■■□□□ 1.1
RIPK4P57078 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.9■■□□□ 1.1
RIPK4P57078 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK4P57078 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RIPK4P57078 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.89■■□□□ 1.1
RIPK4P57078 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
RIPK4P57078 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RIPK4P57078 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RIPK4P57078 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
RIPK4P57078 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RIPK4P57078 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RIPK4P57078 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK4P57078 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK4P57078 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.89■■□□□ 1.09
RIPK4P57078 AC254562.1-201ENST00000417586 456 ntBASIC21.89■■□□□ 1.09
RIPK4P57078 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
RIPK4P57078 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.89■■□□□ 1.09
RIPK4P57078 AC243562.1-201ENST00000560672 389 ntBASIC21.89■■□□□ 1.09
RIPK4P57078 AL135744.1-201ENST00000565098 629 ntBASIC21.89■■□□□ 1.09
RIPK4P57078 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.89■■□□□ 1.09
RIPK4P57078 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.89■■□□□ 1.09
RIPK4P57078 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.89■■□□□ 1.09
RIPK4P57078 AC021097.1-201ENST00000607902 574 ntBASIC21.89■■□□□ 1.09
RIPK4P57078 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK4P57078 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK4P57078 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.89■■□□□ 1.09
RIPK4P57078 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms