Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLDN6P56747 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLDN6P56747 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN6P56747 U91328.1-201ENST00000437528 223 ntBASIC16.07■□□□□ 0.16
CLDN6P56747 KRT17P7-201ENST00000451704 1104 ntBASIC16.07■□□□□ 0.16
CLDN6P56747 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN6P56747 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN6P56747 HILS1-202ENST00000545329 423 ntBASIC16.07■□□□□ 0.16
CLDN6P56747 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 RARRES2P9-201ENST00000565168 469 ntBASIC16.07■□□□□ 0.16
CLDN6P56747 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN6P56747 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN6P56747 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN6P56747 AC018529.1-201ENST00000613063 361 ntBASIC16.07■□□□□ 0.16
CLDN6P56747 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN6P56747 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN6P56747 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLDN6P56747 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CLDN6P56747 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
CLDN6P56747 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN6P56747 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN6P56747 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN6P56747 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN6P56747 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLDN6P56747 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 ARSEP1-201ENST00000420443 635 ntBASIC16.06■□□□□ 0.16
CLDN6P56747 AC142381.1-201ENST00000426099 345 ntBASIC16.06■□□□□ 0.16
CLDN6P56747 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN6P56747 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN6P56747 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN6P56747 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN6P56747 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 AC008738.7-201ENST00000609744 511 ntBASIC16.06■□□□□ 0.16
CLDN6P56747 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.06■□□□□ 0.16
CLDN6P56747 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN6P56747 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN6P56747 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN6P56747 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CLDN6P56747 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN6P56747 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLDN6P56747 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CLDN6P56747 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN6P56747 HCG4-201ENST00000418983 998 ntBASIC16.05■□□□□ 0.16
CLDN6P56747 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.05■□□□□ 0.16
CLDN6P56747 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms