Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PER3P56645 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PER3P56645 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 AL023806.1-201ENST00000603994 1649 ntBASIC15.61■□□□□ 0.09
PER3P56645 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PER3P56645 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PER3P56645 LINC00554-201ENST00000564841 3011 ntBASIC15.61■□□□□ 0.09
PER3P56645 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.61■□□□□ 0.09
PER3P56645 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PER3P56645 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PER3P56645 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.61■□□□□ 0.09
PER3P56645 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.61■□□□□ 0.09
PER3P56645 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.61■□□□□ 0.09
PER3P56645 SIGLEC30P-201ENST00000455569 941 ntBASIC15.61■□□□□ 0.09
PER3P56645 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.61■□□□□ 0.09
PER3P56645 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.61■□□□□ 0.09
PER3P56645 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.61■□□□□ 0.09
PER3P56645 AC025678.2-201ENST00000562061 970 ntBASIC15.61■□□□□ 0.09
PER3P56645 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.61■□□□□ 0.09
PER3P56645 AC004835.2-201ENST00000603762 682 ntBASIC15.61■□□□□ 0.09
PER3P56645 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.61■□□□□ 0.09
PER3P56645 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.61■□□□□ 0.09
PER3P56645 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.61■□□□□ 0.09
PER3P56645 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PER3P56645 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.61■□□□□ 0.09
PER3P56645 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PER3P56645 AC092850.2-201ENST00000623821 2697 ntBASIC15.61■□□□□ 0.09
PER3P56645 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.6■□□□□ 0.09
PER3P56645 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PER3P56645 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 AL353593.2-201ENST00000602529 1483 ntBASIC15.6■□□□□ 0.09
PER3P56645 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PER3P56645 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.6■□□□□ 0.09
PER3P56645 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PER3P56645 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
PER3P56645 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.6■□□□□ 0.09
PER3P56645 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
PER3P56645 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.6■□□□□ 0.09
PER3P56645 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.6■□□□□ 0.09
PER3P56645 STK19B-204ENST00000512515 211 ntBASIC15.6■□□□□ 0.09
PER3P56645 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.6■□□□□ 0.09
PER3P56645 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.6■□□□□ 0.09
PER3P56645 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.6■□□□□ 0.09
PER3P56645 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.6■□□□□ 0.09
PER3P56645 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.6■□□□□ 0.09
PER3P56645 GGTLC5P-201ENST00000617623 998 ntBASIC15.6■□□□□ 0.09
PER3P56645 AC093028.1-201ENST00000622998 982 ntBASIC15.6■□□□□ 0.09
PER3P56645 AC007064.4-201ENST00000637740 555 ntBASIC15.6■□□□□ 0.09
PER3P56645 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
PER3P56645 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 AC006504.4-201ENST00000592118 1568 ntBASIC15.6■□□□□ 0.09
PER3P56645 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PER3P56645 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PER3P56645 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PER3P56645 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms