Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SMSP52788 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 AP002414.3-201ENST00000589352 1468 ntBASIC15.79■□□□□ 0.12
SMSP52788 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.79■□□□□ 0.12
SMSP52788 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 COX5BP2-201ENST00000392354 334 ntBASIC15.79■□□□□ 0.12
SMSP52788 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 AC007967.2-201ENST00000432613 625 ntBASIC15.79■□□□□ 0.12
SMSP52788 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.79■□□□□ 0.12
SMSP52788 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 AP000867.4-201ENST00000641616 219 ntBASIC15.79■□□□□ 0.12
SMSP52788 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SMSP52788 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SMSP52788 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.79■□□□□ 0.12
SMSP52788 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.79■□□□□ 0.12
SMSP52788 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMSP52788 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.78■□□□□ 0.12
SMSP52788 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.78■□□□□ 0.12
SMSP52788 AC097374.2-201ENST00000618617 1306 ntBASIC15.78■□□□□ 0.12
SMSP52788 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.78■□□□□ 0.12
SMSP52788 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 IGHV3-52-201ENST00000519770 353 ntBASIC15.78■□□□□ 0.12
SMSP52788 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
SMSP52788 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 AC124947.2-201ENST00000547118 1133 ntBASIC15.78■□□□□ 0.12
SMSP52788 AC134684.3-201ENST00000641758 218 ntBASIC15.78■□□□□ 0.12
SMSP52788 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.78■□□□□ 0.12
SMSP52788 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.78■□□□□ 0.12
SMSP52788 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SMSP52788 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.78■□□□□ 0.12
SMSP52788 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMSP52788 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.77■□□□□ 0.12
SMSP52788 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.12
SMSP52788 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SMSP52788 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SMSP52788 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms