Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FDX1P1-201ENST00000449115 551 ntBASIC16.17■□□□□ 0.18
SLC6A12P48065 AC079776.4-201ENST00000511039 504 ntBASIC16.17■□□□□ 0.18
SLC6A12P48065 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A12P48065 AC145285.3-201ENST00000564603 959 ntBASIC16.17■□□□□ 0.18
SLC6A12P48065 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 AL121894.2-201ENST00000602977 491 ntBASIC16.17■□□□□ 0.18
SLC6A12P48065 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC6A12P48065 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A12P48065 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A12P48065 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A12P48065 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A12P48065 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A12P48065 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A12P48065 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A12P48065 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A12P48065 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A12P48065 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC6A12P48065 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 RHOQP3-201ENST00000437982 621 ntBASIC16.16■□□□□ 0.18
SLC6A12P48065 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC6A12P48065 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A12P48065 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SLC6A12P48065 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SLC6A12P48065 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A12P48065 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A12P48065 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A12P48065 AC010507.1-201ENST00000633895 436 ntBASIC16.16■□□□□ 0.18
SLC6A12P48065 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 AL645728.2-201ENST00000641974 660 ntBASIC16.16■□□□□ 0.18
SLC6A12P48065 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A12P48065 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A12P48065 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 AC092364.2-201ENST00000596710 2692 ntBASIC16.16■□□□□ 0.18
SLC6A12P48065 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A12P48065 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SLC6A12P48065 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A12P48065 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 TNRC18P3-201ENST00000441896 2691 ntBASIC16.15■□□□□ 0.18
SLC6A12P48065 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A12P48065 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SLC6A12P48065 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A12P48065 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
SLC6A12P48065 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 RNU1-129P-201ENST00000384064 167 ntBASIC16.15■□□□□ 0.18
SLC6A12P48065 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A12P48065 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC6A12P48065 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 AC096734.2-201ENST00000562054 433 ntBASIC16.15■□□□□ 0.18
SLC6A12P48065 AC034105.1-201ENST00000563488 319 ntBASIC16.15■□□□□ 0.18
SLC6A12P48065 U1.21-201ENST00000580816 167 ntBASIC16.15■□□□□ 0.18
SLC6A12P48065 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC6A12P48065 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A12P48065 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A12P48065 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.15■□□□□ 0.18
SLC6A12P48065 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms